{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 177774160, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 174769279, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 177774160, 
            "paired_qc_failed": 0, 
            "read1": 88887080, 
            "read1_qc_failed": 0, 
            "read2": 88887080, 
            "read2_qc_failed": 0, 
            "paired_properly": 173047582, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.34, 
            "with_itself": 174052574, 
            "with_itself_qc_failed": 0, 
            "singletons": 716705, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.4, 
            "diff_chroms": 499917, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 193594802, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 187969057, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.09, 
            "paired": 193594802, 
            "paired_qc_failed": 0, 
            "read1": 96797401, 
            "read1_qc_failed": 0, 
            "read2": 96797401, 
            "read2_qc_failed": 0, 
            "paired_properly": 184287983, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.19, 
            "with_itself": 185784698, 
            "with_itself_qc_failed": 0, 
            "singletons": 2184359, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.13, 
            "diff_chroms": 610670, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 78655740, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3831924, 
            "paired_opt_dupes": 10192, 
            "dupes_pct": 0.048718
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 78211821, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 539110, 
            "paired_opt_dupes": 19807, 
            "dupes_pct": 0.006893
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 78623604, 
            "distinct_read_pairs": 74793368, 
            "one_read_pair": 71115180, 
            "two_read_pair": 3531585, 
            "NRF": 0.951284, 
            "PBC1": 0.950822, 
            "PBC2": 20.136902
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 77646644, 
            "distinct_read_pairs": 77172156, 
            "one_read_pair": 76701136, 
            "two_read_pair": 467668, 
            "NRF": 0.993889, 
            "PBC1": 0.993897, 
            "PBC2": 164.007664
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 149647632, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 149647632, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 149647632, 
            "paired_qc_failed": 0, 
            "read1": 74823816, 
            "read1_qc_failed": 0, 
            "read2": 74823816, 
            "read2_qc_failed": 0, 
            "paired_properly": 149647632, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 149647632, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 155345422, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 155345422, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 155345422, 
            "paired_qc_failed": 0, 
            "read1": 77672711, 
            "read1_qc_failed": 0, 
            "read2": 77672711, 
            "read2_qc_failed": 0, 
            "paired_properly": 155345422, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 155345422, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 171993, 
        "Np": 0, 
        "N_opt": 171993, 
        "N_consv": 171993, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.201191669627553, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2025816, 
            "argmin_corr": 1500, 
            "min_corr": 0.1826905, 
            "NSC": 1.101271, 
            "RSC": 0.9301209
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.418345358196
        }, 
        "rep1-pr1": {
            "FRiP": 0.392664125372
        }, 
        "rep1-pr2": {
            "FRiP": 0.392845973036
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.372969452427
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.21456697389, 
            "auc": 0.496668676594, 
            "ch_div": 0.100422634327, 
            "elbow_pt": 0.0, 
            "jsd": 0.739881966269, 
            "syn_auc": 0.504773167281, 
            "syn_elbow_pt": 0.302002074837, 
            "syn_jsd": 0.40638917202
        }
    ]
}