{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 108764568, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 100481300, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.38, 
            "paired": 108764568, 
            "paired_qc_failed": 0, 
            "read1": 54382284, 
            "read1_qc_failed": 0, 
            "read2": 54382284, 
            "read2_qc_failed": 0, 
            "paired_properly": 98103749, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.2, 
            "with_itself": 99709646, 
            "with_itself_qc_failed": 0, 
            "singletons": 771654, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.71, 
            "diff_chroms": 216809, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 334658014, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 328702336, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.22, 
            "paired": 334658014, 
            "paired_qc_failed": 0, 
            "read1": 167329007, 
            "read1_qc_failed": 0, 
            "read2": 167329007, 
            "read2_qc_failed": 0, 
            "paired_properly": 320102484, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.65, 
            "with_itself": 326658529, 
            "with_itself_qc_failed": 0, 
            "singletons": 2043807, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.61, 
            "diff_chroms": 620372, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44259037, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1186245, 
            "paired_opt_dupes": 6211, 
            "dupes_pct": 0.026802
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 141663705, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1830718, 
            "paired_opt_dupes": 10233, 
            "dupes_pct": 0.012923
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 44135742, 
            "distinct_read_pairs": 42962567, 
            "one_read_pair": 41815776, 
            "two_read_pair": 1121094, 
            "NRF": 0.973419, 
            "PBC1": 0.973307, 
            "PBC2": 37.299081
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 141095473, 
            "distinct_read_pairs": 139340732, 
            "one_read_pair": 137631421, 
            "two_read_pair": 1682298, 
            "NRF": 0.987563, 
            "PBC1": 0.987733, 
            "PBC2": 81.811558
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 86145584, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 86145584, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 86145584, 
            "paired_qc_failed": 0, 
            "read1": 43072792, 
            "read1_qc_failed": 0, 
            "read2": 43072792, 
            "read2_qc_failed": 0, 
            "paired_properly": 86145584, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 86145584, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 279665974, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 279665974, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 279665974, 
            "paired_qc_failed": 0, 
            "read1": 139832987, 
            "read1_qc_failed": 0, 
            "read2": 139832987, 
            "read2_qc_failed": 0, 
            "paired_properly": 279665974, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 279665974, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 111893, 
        "Np": 0, 
        "N_opt": 111893, 
        "N_consv": 111893, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.185461260500896, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1885382, 
            "argmin_corr": 1500, 
            "min_corr": 0.1758405, 
            "NSC": 1.054713, 
            "RSC": 0.757678
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.298801093519
        }, 
        "rep1-pr1": {
            "FRiP": 0.284664780746
        }, 
        "rep1-pr2": {
            "FRiP": 0.285133946608
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.24728962308
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.24941863043, 
            "auc": 0.49560561604, 
            "ch_div": 0.104349912042, 
            "elbow_pt": 0.0, 
            "jsd": 0.667369662562, 
            "syn_auc": 0.504185915411, 
            "syn_elbow_pt": 0.25268710394, 
            "syn_jsd": 0.34153982522
        }
    ]
}