{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 134044994, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 130333807, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.23, 
            "paired": 134044994, 
            "paired_qc_failed": 0, 
            "read1": 67022497, 
            "read1_qc_failed": 0, 
            "read2": 67022497, 
            "read2_qc_failed": 0, 
            "paired_properly": 128253119, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.68, 
            "with_itself": 129669002, 
            "with_itself_qc_failed": 0, 
            "singletons": 664805, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.5, 
            "diff_chroms": 150322, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 334658014, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 328702336, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.22, 
            "paired": 334658014, 
            "paired_qc_failed": 0, 
            "read1": 167329007, 
            "read1_qc_failed": 0, 
            "read2": 167329007, 
            "read2_qc_failed": 0, 
            "paired_properly": 320102484, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.65, 
            "with_itself": 326658529, 
            "with_itself_qc_failed": 0, 
            "singletons": 2043807, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.61, 
            "diff_chroms": 620372, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58809729, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3050468, 
            "paired_opt_dupes": 9778, 
            "dupes_pct": 0.05187
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 141663705, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1830718, 
            "paired_opt_dupes": 10233, 
            "dupes_pct": 0.012923
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 58768122, 
            "distinct_read_pairs": 55720138, 
            "one_read_pair": 52801814, 
            "two_read_pair": 2793480, 
            "NRF": 0.948135, 
            "PBC1": 0.947625, 
            "PBC2": 18.901805
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 141095473, 
            "distinct_read_pairs": 139340732, 
            "one_read_pair": 137631421, 
            "two_read_pair": 1682298, 
            "NRF": 0.987563, 
            "PBC1": 0.987733, 
            "PBC2": 81.811558
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 111518522, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 111518522, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 111518522, 
            "paired_qc_failed": 0, 
            "read1": 55759261, 
            "read1_qc_failed": 0, 
            "read2": 55759261, 
            "read2_qc_failed": 0, 
            "paired_properly": 111518522, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 111518522, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 279665974, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 279665974, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 279665974, 
            "paired_qc_failed": 0, 
            "read1": 139832987, 
            "read1_qc_failed": 0, 
            "read2": 139832987, 
            "read2_qc_failed": 0, 
            "paired_properly": 279665974, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 279665974, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 152294, 
        "Np": 0, 
        "N_opt": 152294, 
        "N_consv": 152294, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.192384186862299, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1917325, 
            "argmin_corr": 1500, 
            "min_corr": 0.1757572, 
            "NSC": 1.094602, 
            "RSC": 1.04079
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.384660340049
        }, 
        "rep1-pr1": {
            "FRiP": 0.362718919945
        }, 
        "rep1-pr2": {
            "FRiP": 0.362530388474
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.336474073827
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.23087230535, 
            "auc": 0.496140934426, 
            "ch_div": 0.100927554774, 
            "elbow_pt": 0.0, 
            "jsd": 0.720404205981, 
            "syn_auc": 0.502489678902, 
            "syn_elbow_pt": 0.289800432252, 
            "syn_jsd": 0.373600833563
        }
    ]
}