/EXTERNAL CREST/K006455_1_lane_gembs/COC7.Bisulfite-Seq.DNA_Methylation.JGAX00000012147_7

BACK

SAMPLE K006455_1_lane_gembs LANE COC7.Bisulfite-Seq.DNA_Methylation.JGAX00000012147_7

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1765861301 100.00 % 1765861301 100.00 % 0 0.00 %
General Reads 1580691891 89.51 % 1580691891 89.51 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 25425699 1.44 % 25425699 1.44 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 159743711 9.05 % 159743711 9.05 % 0 0.00 %
Bisulfite_reads C2T 791825565 44.84 % 791825565 44.84 % 0 0.00 %
Bisulfite_reads G2A 814292025 46.11 % 814292025 46.11 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1246486351
Average Unique 77.61 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 80968391288 45.40 %
Base Counts Overall C 37823116626 21.21 %
Base Counts Overall G 6517363519 3.65 %
Base Counts Overall T 51231802945 28.73 %
Base Counts Overall N 1811317023 1.02 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9003312925549805
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC7.Bisulfite-Seq.DNA_Methylation.JGAX00000012147_7.mapq.png



Read Length

Read Length Reads
100 1765861301