/EXTERNAL CREST/K006452_1_lane_gembs/COC4.Bisulfite-Seq.DNA_Methylation.JGAX00000012144_7

BACK

SAMPLE K006452_1_lane_gembs LANE COC4.Bisulfite-Seq.DNA_Methylation.JGAX00000012144_7

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2021630399 100.00 % 2021630399 100.00 % 0 0.00 %
General Reads 1828602193 90.45 % 1828602193 90.45 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 28670558 1.42 % 28670558 1.42 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 164357648 8.13 % 164357648 8.13 % 0 0.00 %
Bisulfite_reads C2T 921370492 45.58 % 921370492 45.58 % 0 0.00 %
Bisulfite_reads G2A 935902259 46.29 % 935902259 46.29 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1431182713
Average Unique 77.06 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 94234974548 46.15 %
Base Counts Overall C 43356999055 21.23 %
Base Counts Overall G 7087830629 3.47 %
Base Counts Overall T 57450580352 28.14 %
Base Counts Overall N 2054285715 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8980289262097904
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC4.Bisulfite-Seq.DNA_Methylation.JGAX00000012144_7.mapq.png



Read Length

Read Length Reads
100 2021630399