{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 29529594, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27959384, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 25581613, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24555314, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.99, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21221242, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1174223, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.055332
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 18303580, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 804702, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.043964
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21188587, 
            "distinct_read_pairs": 20037494, 
            "one_read_pair": 18953426, 
            "two_read_pair": 1031118, 
            "NRF": 0.945674, 
            "PBC1": 0.945898, 
            "PBC2": 18.381433
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 18206866, 
            "distinct_read_pairs": 17487239, 
            "one_read_pair": 16804082, 
            "two_read_pair": 659675, 
            "NRF": 0.960475, 
            "PBC1": 0.960934, 
            "PBC2": 25.473274
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 20047019, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20047019, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 17498878, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17498878, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 35444, 
        "Np": 0, 
        "N_opt": 35444, 
        "N_consv": 35444, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.17531465506793, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1863882, 
            "argmin_corr": 1500, 
            "min_corr": 0.169576, 
            "NSC": 1.033841, 
            "RSC": 0.3413384
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.103113096131
        }, 
        "rep1-pr1": {
            "FRiP": 0.112719459269
        }, 
        "rep1-pr2": {
            "FRiP": 0.112701403304
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0858210234619
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.24635701131, 
            "auc": 0.486736122599, 
            "ch_div": 0.185415475415, 
            "elbow_pt": 7.6478377012e-48, 
            "jsd": 0.623291094699, 
            "syn_auc": 0.516446933558, 
            "syn_elbow_pt": 0.115201806903, 
            "syn_jsd": 0.27565492111
        }
    ]
}