/EXTERNAL CREST/K006462_1_lane_gembs/COC21.Bisulfite-Seq.DNA_Methylation.JGAX00000012154_2

BACK

SAMPLE K006462_1_lane_gembs LANE COC21.Bisulfite-Seq.DNA_Methylation.JGAX00000012154_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1471296665 100.00 % 1471296665 100.00 % 0 0.00 %
General Reads 1210764486 82.29 % 1210764486 82.29 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 15151727 1.03 % 15151727 1.03 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 245380452 16.68 % 245380452 16.68 % 0 0.00 %
Bisulfite_reads C2T 609483433 41.42 % 609483433 41.42 % 0 0.00 %
Bisulfite_reads G2A 616432780 41.90 % 616432780 41.90 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 928419351
Average Unique 75.73 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 66896549460 45.02 %
Base Counts Overall C 32180165852 21.66 %
Base Counts Overall G 7568994251 5.09 %
Base Counts Overall T 40468292492 27.23 %
Base Counts Overall N 1486961110 1.00 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8894004319704043
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC21.Bisulfite-Seq.DNA_Methylation.JGAX00000012154_2.mapq.png



Read Length

Read Length Reads
100 1471296665