/EXTERNAL CREST/K006453_1_lane_gembs/COC5.Bisulfite-Seq.DNA_Methylation.JGAX00000012145_7

BACK

SAMPLE K006453_1_lane_gembs LANE COC5.Bisulfite-Seq.DNA_Methylation.JGAX00000012145_7

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1689648923 100.00 % 1689648923 100.00 % 0 0.00 %
General Reads 1521122863 90.03 % 1521122863 90.03 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 22960220 1.36 % 22960220 1.36 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 145565840 8.62 % 145565840 8.62 % 0 0.00 %
Bisulfite_reads C2T 767183653 45.40 % 767183653 45.40 % 0 0.00 %
Bisulfite_reads G2A 776899430 45.98 % 776899430 45.98 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1181052464
Average Unique 76.49 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 78345713305 45.91 %
Base Counts Overall C 36340401659 21.29 %
Base Counts Overall G 6076743020 3.56 %
Base Counts Overall T 48151635352 28.22 %
Base Counts Overall N 1740047887 1.02 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8978794613629824
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC5.Bisulfite-Seq.DNA_Methylation.JGAX00000012145_7.mapq.png



Read Length

Read Length Reads
100 1689648923