{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 34794840, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32850403, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.41, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 51713349, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50337706, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.34, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25497281, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1771807, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.06949
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 37118890, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 706927, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.019045
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25479208, 
            "distinct_read_pairs": 23718564, 
            "one_read_pair": 22087625, 
            "two_read_pair": 1517821, 
            "NRF": 0.930899, 
            "PBC1": 0.931238, 
            "PBC2": 14.552194
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 36931248, 
            "distinct_read_pairs": 36399991, 
            "one_read_pair": 35884783, 
            "two_read_pair": 507202, 
            "NRF": 0.985615, 
            "PBC1": 0.985846, 
            "PBC2": 70.750476
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 23725474, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23725474, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 36411963, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36411963, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 44343, 
        "Np": 0, 
        "N_opt": 44343, 
        "N_consv": 44343, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.190814135964282, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1943279, 
            "argmin_corr": 1500, 
            "min_corr": 0.1728152, 
            "NSC": 1.104152, 
            "RSC": 0.8366672
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.199948669421
        }, 
        "rep1-pr1": {
            "FRiP": 0.187701676166
        }, 
        "rep1-pr2": {
            "FRiP": 0.187700427072
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.175401656299
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.225446283765, 
            "auc": 0.487803942191, 
            "ch_div": 0.179713459716, 
            "elbow_pt": 9.4850813763e-57, 
            "jsd": 0.623181132966, 
            "syn_auc": 0.491882042841, 
            "syn_elbow_pt": 0.213588494544, 
            "syn_jsd": 0.33303007562
        }
    ]
}