{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 25326221, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24574983, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.03, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 51713349, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50337706, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.34, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 18865671, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1199578, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.063585
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 37118890, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 706927, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.019045
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 18848046, 
            "distinct_read_pairs": 17658857, 
            "one_read_pair": 16546554, 
            "two_read_pair": 1045982, 
            "NRF": 0.936907, 
            "PBC1": 0.937012, 
            "PBC2": 15.819157
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 36931248, 
            "distinct_read_pairs": 36399991, 
            "one_read_pair": 35884783, 
            "two_read_pair": 507202, 
            "NRF": 0.985615, 
            "PBC1": 0.985846, 
            "PBC2": 70.750476
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 17666093, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17666093, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 36411963, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36411963, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 24751, 
        "Np": 0, 
        "N_opt": 24751, 
        "N_consv": 24751, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.187041359133763, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1934594, 
            "argmin_corr": 1500, 
            "min_corr": 0.168183, 
            "NSC": 1.11213, 
            "RSC": 0.7460861
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.146180625147
        }, 
        "rep1-pr1": {
            "FRiP": 0.147439278699
        }, 
        "rep1-pr2": {
            "FRiP": 0.147431253554
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.13187146573
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.231702995178, 
            "auc": 0.485856344186, 
            "ch_div": 0.206953980015, 
            "elbow_pt": 5.64430722785e-42, 
            "jsd": 0.578078828568, 
            "syn_auc": 0.503114433957, 
            "syn_elbow_pt": 0.191279373363, 
            "syn_jsd": 0.302551856275
        }
    ]
}
