/EXTERNAL CREST/K006456_1_lane_gembs/COC8.Bisulfite-Seq.DNA_Methylation.JGAX00000012148_7

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SAMPLE K006456_1_lane_gembs LANE COC8.Bisulfite-Seq.DNA_Methylation.JGAX00000012148_7

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	2128432689	100.00 %	2128432689	100.00 %	0	0.00 %
General Reads	1903679575	89.44 %	1903679575	89.44 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	29422938	1.38 %	29422938	1.38 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	195330176	9.18 %	195330176	9.18 %	0	0.00 %
Bisulfite_reads C2T	954302985	44.84 %	954302985	44.84 %	0	0.00 %
Bisulfite_reads G2A	978799528	45.99 %	978799528	45.99 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	1502006467
Average Unique	77.70 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	98326395367	45.74 %
Base Counts Overall C	45422173607	21.13 %
Base Counts Overall G	7929422848	3.69 %
Base Counts Overall T	61103735892	28.42 %
Base Counts Overall N	2189973875	1.02 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.8970704096411563
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
100	2128432689