{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38145081, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36859540, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.63, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35024136, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33172149, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.71, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 27182682, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1626723, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.059844
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 23040927, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2010808, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.087271
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 27174539, 
            "distinct_read_pairs": 25552262, 
            "one_read_pair": 24026194, 
            "two_read_pair": 1447016, 
            "NRF": 0.940302, 
            "PBC1": 0.940277, 
            "PBC2": 16.603959
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 22965840, 
            "distinct_read_pairs": 21019736, 
            "one_read_pair": 19214212, 
            "two_read_pair": 1676157, 
            "NRF": 0.915261, 
            "PBC1": 0.914103, 
            "PBC2": 11.463253
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 25555959, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25555959, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 21030119, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21030119, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 8114, 
        "Np": 0, 
        "N_opt": 8114, 
        "N_consv": 8114, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 135, 
            "corr_est_frag_len": 0.172347829937557, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1860074, 
            "argmin_corr": 1500, 
            "min_corr": 0.1684727, 
            "NSC": 1.023002, 
            "RSC": 0.2209984
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0157515376045
        }, 
        "rep1-pr1": {
            "FRiP": 0.0379982229673
        }, 
        "rep1-pr2": {
            "FRiP": 0.0377853892091
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.00822748461104
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.292594403051, 
            "auc": 0.488248667021, 
            "ch_div": 0.148308388681, 
            "elbow_pt": 3.35862339039e-61, 
            "jsd": 0.55293157981, 
            "syn_auc": 0.514687009827, 
            "syn_elbow_pt": 0.0547969679926, 
            "syn_jsd": 0.211845375566
        }
    ]
}