{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 52303818, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51849807, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.13, 
            "paired": 52303818, 
            "paired_qc_failed": 0, 
            "read1": 26151909, 
            "read1_qc_failed": 0, 
            "read2": 26151909, 
            "read2_qc_failed": 0, 
            "paired_properly": 51485630, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 98.44, 
            "with_itself": 51557739, 
            "with_itself_qc_failed": 0, 
            "singletons": 292068, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.56, 
            "diff_chroms": 15435, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 96892848, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 95177950, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.23, 
            "paired": 96892848, 
            "paired_qc_failed": 0, 
            "read1": 48446424, 
            "read1_qc_failed": 0, 
            "read2": 48446424, 
            "read2_qc_failed": 0, 
            "paired_properly": 93194227, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.18, 
            "with_itself": 94492205, 
            "with_itself_qc_failed": 0, 
            "singletons": 685745, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.71, 
            "diff_chroms": 166792, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 23787499, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 189402, 
            "paired_opt_dupes": 1835, 
            "dupes_pct": 0.007962
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 40925788, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 246444, 
            "paired_opt_dupes": 1204, 
            "dupes_pct": 0.006022
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23778748, 
            "distinct_read_pairs": 23589634, 
            "one_read_pair": 23404830, 
            "two_read_pair": 181000, 
            "NRF": 0.992047, 
            "PBC1": 0.992166, 
            "PBC2": 129.308453
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 40844131, 
            "distinct_read_pairs": 40626962, 
            "one_read_pair": 40418355, 
            "two_read_pair": 204968, 
            "NRF": 0.994683, 
            "PBC1": 0.994865, 
            "PBC2": 197.193489
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 47196194, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47196194, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 47196194, 
            "paired_qc_failed": 0, 
            "read1": 23598097, 
            "read1_qc_failed": 0, 
            "read2": 23598097, 
            "read2_qc_failed": 0, 
            "paired_properly": 47196194, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 47196194, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 81358688, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 81358688, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 81358688, 
            "paired_qc_failed": 0, 
            "read1": 40679344, 
            "read1_qc_failed": 0, 
            "read2": 40679344, 
            "read2_qc_failed": 0, 
            "paired_properly": 81358688, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 81358688, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 94254, 
        "Np": 0, 
        "N_opt": 94254, 
        "N_consv": 94254, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.195905645390484, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.1866256, 
            "argmin_corr": 1500, 
            "min_corr": 0.1718892, 
            "NSC": 1.139721, 
            "RSC": 1.629737
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.380839185551
        }, 
        "rep1-pr1": {
            "FRiP": 0.357671890967
        }, 
        "rep1-pr2": {
            "FRiP": 0.357724371646
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.331443696837
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.196748092748, 
            "auc": 0.494088631709, 
            "ch_div": 0.143005090188, 
            "elbow_pt": 1.93606802622e-245, 
            "jsd": 0.728078803946, 
            "syn_auc": 0.497441749909, 
            "syn_elbow_pt": 0.288656649682, 
            "syn_jsd": 0.415599528435
        }
    ]
}
