/cemt/A77947_1_lane_gembs/HGJ2KCCXY_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 249991572 | 100.00 % | 124995786 | 100.00 % | 124995786 | 100.00 % |
| General Reads | 244059489 | 97.63 % | 123115410 | 98.50 % | 120944079 | 96.76 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2035958 | 0.81 % | 1025419 | 0.82 % | 1010539 | 0.81 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3896125 | 1.56 % | 854957 | 0.68 % | 3041168 | 2.43 % |
| Bisulfite_reads C2T | 125491992 | 50.20 % | 63285673 | 50.63 % | 62206319 | 49.77 % |
| Bisulfite_reads G2A | 120603455 | 48.24 % | 60855156 | 48.69 % | 59748299 | 47.80 % |
| Concept | Value |
|---|---|
| Unique Fragments | 108288740 |
| Average Unique | 86.63 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 14747681381 | 39.07 % | 5831974786 | 30.90 % | 8915706595 | 47.24 % |
| Base Counts Overall C | 4018227405 | 10.64 % | 171016632 | 0.91 % | 3847210773 | 20.38 % |
| Base Counts Overall G | 3856254957 | 10.22 % | 3670172561 | 19.45 % | 186082396 | 0.99 % |
| Base Counts Overall T | 14875399518 | 39.41 % | 9075724184 | 48.08 % | 5799675334 | 30.73 % |
| Base Counts Overall N | 251164111 | 0.67 % | 125475523 | 0.66 % | 125688588 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9963499291820681 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 119629187 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 124995786 |
| 150 | 124995786 |
| Insert Size Histogram |
|---|
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