/CEMT/A77948_3_lane_gembs/HGJ2KCCXY_4_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 861441434 | 100.00 % | 430720717 | 100.00 % | 430720717 | 100.00 % |
| General Reads | 595147603 | 69.09 % | 298327517 | 69.26 % | 296820086 | 68.91 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 751011 | 0.09 % | 376133 | 0.09 % | 374878 | 0.09 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 265542820 | 30.83 % | 132017067 | 30.65 % | 133525753 | 31.00 % |
| Bisulfite_reads C2T | 304429155 | 35.34 % | 152568721 | 35.42 % | 151860434 | 35.26 % |
| Bisulfite_reads G2A | 291469459 | 33.84 % | 146134929 | 33.93 % | 145334530 | 33.74 % |
| Concept | Value |
|---|---|
| Unique Fragments | 253820383 |
| Average Unique | 58.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 45114840270 | 34.68 % | 18840941790 | 28.97 % | 26273898480 | 40.40 % |
| Base Counts Overall C | 19365143881 | 14.89 % | 4861538944 | 7.47 % | 14503604937 | 22.30 % |
| Base Counts Overall G | 19339008455 | 14.87 % | 14213457331 | 21.85 % | 5125551124 | 7.88 % |
| Base Counts Overall T | 45389583960 | 34.89 % | 26688922354 | 41.04 % | 18700661606 | 28.75 % |
| Base Counts Overall N | 869079968 | 0.67 % | 433967848 | 0.67 % | 435112120 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9077929646861322 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 284585563 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 430720717 |
| 150 | 430720717 |
| Insert Size Histogram |
|---|
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