/cemt/A77949_1_lane_gembs/H5235CCXY_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1021508182 | 100.00 % | 510754091 | 100.00 % | 510754091 | 100.00 % |
| General Reads | 815401641 | 79.82 % | 410792363 | 80.43 % | 404609278 | 79.22 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5409147 | 0.53 % | 2720349 | 0.53 % | 2688798 | 0.53 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 200697394 | 19.65 % | 97241379 | 19.04 % | 103456015 | 20.26 % |
| Bisulfite_reads C2T | 417964439 | 40.92 % | 210523143 | 41.22 % | 207441296 | 40.61 % |
| Bisulfite_reads G2A | 402846349 | 39.44 % | 202989569 | 39.74 % | 199856780 | 39.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 360783473 |
| Average Unique | 70.64 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 56835739065 | 36.85 % | 23895828446 | 30.98 % | 32939910619 | 42.71 % |
| Base Counts Overall C | 19580432909 | 12.69 % | 3675518821 | 4.77 % | 15904914088 | 20.62 % |
| Base Counts Overall G | 19400245790 | 12.58 % | 15536714262 | 20.15 % | 3863531528 | 5.01 % |
| Base Counts Overall T | 57388917945 | 37.21 % | 33493741015 | 43.43 % | 23895176930 | 30.98 % |
| Base Counts Overall N | 1042399773 | 0.68 % | 522065197 | 0.68 % | 520334576 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9858010075786314 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 396731562 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 510754091 |
| 150 | 510754091 |
| Insert Size Histogram |
|---|
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