/cemt/A77951_1_lane_gembs

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SAMPLE A77951_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1212039212 100.00 % 606019606 100.00 % 606019606 100.00 %
General Reads 1043814749 86.12 % 526259681 86.84 % 517555068 85.40 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 8215497 0.68 % 4133457 0.68 % 4082040 0.67 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 160008966 13.20 % 75626468 12.48 % 84382498 13.92 %
Bisulfite_reads C2T 537160087 44.32 % 270743543 44.68 % 266416544 43.96 %
Bisulfite_reads G2A 514870159 42.48 % 259649595 42.85 % 255220564 42.11 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 459459246
Average Unique 75.82 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 68804874696 37.59 % 28622164927 31.28 % 40182709769 43.91 %
Base Counts Overall C 21959356788 12.00 % 3145793187 3.44 % 18813563601 20.56 %
Base Counts Overall G 21547127431 11.77 % 18238107052 19.93 % 3309020379 3.62 %
Base Counts Overall T 69473795739 37.96 % 40886318796 44.68 % 28587476943 31.24 %
Base Counts Overall N 1232766358 0.67 % 616576544 0.67 % 616189814 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9913454550427798
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 509477781



Mapping Quality

Mapping Quality Histogram
A77951_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A77951_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
H5235CCXY_5_1
HGJ2KCCXY_7_1