{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 156349930, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 153531607, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.2, 
            "paired": 156349930, 
            "paired_qc_failed": 0, 
            "read1": 78174965, 
            "read1_qc_failed": 0, 
            "read2": 78174965, 
            "read2_qc_failed": 0, 
            "paired_properly": 151782010, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.08, 
            "with_itself": 152454422, 
            "with_itself_qc_failed": 0, 
            "singletons": 1077185, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.69, 
            "diff_chroms": 103961, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 129938162, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 127236885, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.92, 
            "paired": 129938162, 
            "paired_qc_failed": 0, 
            "read1": 64969081, 
            "read1_qc_failed": 0, 
            "read2": 64969081, 
            "read2_qc_failed": 0, 
            "paired_properly": 124171709, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.56, 
            "with_itself": 126465025, 
            "with_itself_qc_failed": 0, 
            "singletons": 771860, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.59, 
            "diff_chroms": 239097, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 64094731, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1806906, 
            "paired_opt_dupes": 1964, 
            "dupes_pct": 0.028191
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 54765194, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 445948, 
            "paired_opt_dupes": 1420, 
            "dupes_pct": 0.008143
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 64079271, 
            "distinct_read_pairs": 62273742, 
            "one_read_pair": 60532363, 
            "two_read_pair": 1691107, 
            "NRF": 0.971824, 
            "PBC1": 0.972037, 
            "PBC2": 35.79452
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 54643833, 
            "distinct_read_pairs": 54251204, 
            "one_read_pair": 53876689, 
            "two_read_pair": 366311, 
            "NRF": 0.992815, 
            "PBC1": 0.993097, 
            "PBC2": 147.079091
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 124575650, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 124575650, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 124575650, 
            "paired_qc_failed": 0, 
            "read1": 62287825, 
            "read1_qc_failed": 0, 
            "read2": 62287825, 
            "read2_qc_failed": 0, 
            "paired_properly": 124575650, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 124575650, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 108638492, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 108638492, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 108638492, 
            "paired_qc_failed": 0, 
            "read1": 54319246, 
            "read1_qc_failed": 0, 
            "read2": 54319246, 
            "read2_qc_failed": 0, 
            "paired_properly": 108638492, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 108638492, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 176369, 
        "Np": 0, 
        "N_opt": 176369, 
        "N_consv": 176369, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.19524257010099, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2042191, 
            "argmin_corr": 1500, 
            "min_corr": 0.187293, 
            "NSC": 1.042444, 
            "RSC": 0.4696627
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.275857627508
        }, 
        "rep1-pr1": {
            "FRiP": 0.263616782058
        }, 
        "rep1-pr2": {
            "FRiP": 0.263641231002
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.213589040248
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.250100213203, 
            "auc": 0.496356031528, 
            "ch_div": 0.103674884391, 
            "elbow_pt": 0.0, 
            "jsd": 0.619934063605, 
            "syn_auc": 0.50541287128, 
            "syn_elbow_pt": 0.139037191357, 
            "syn_jsd": 0.331735300467
        }
    ]
}
