{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 69476868, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 67169130, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.68, 
            "paired": 69476868, 
            "paired_qc_failed": 0, 
            "read1": 34738434, 
            "read1_qc_failed": 0, 
            "read2": 34738434, 
            "read2_qc_failed": 0, 
            "paired_properly": 65963566, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.94, 
            "with_itself": 66441803, 
            "with_itself_qc_failed": 0, 
            "singletons": 727327, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.05, 
            "diff_chroms": 42455, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 202360194, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 199280518, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.48, 
            "paired": 202360194, 
            "paired_qc_failed": 0, 
            "read1": 101180097, 
            "read1_qc_failed": 0, 
            "read2": 101180097, 
            "read2_qc_failed": 0, 
            "paired_properly": 196010642, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.86, 
            "with_itself": 198492948, 
            "with_itself_qc_failed": 0, 
            "singletons": 787570, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.39, 
            "diff_chroms": 212946, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 26846229, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 338686, 
            "paired_opt_dupes": 1280, 
            "dupes_pct": 0.012616
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 87251527, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1128860, 
            "paired_opt_dupes": 5289, 
            "dupes_pct": 0.012938
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26843326, 
            "distinct_read_pairs": 26504704, 
            "one_read_pair": 26175887, 
            "two_read_pair": 322782, 
            "NRF": 0.987385, 
            "PBC1": 0.987594, 
            "PBC2": 81.09463
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 87198629, 
            "distinct_read_pairs": 86085041, 
            "one_read_pair": 85022082, 
            "two_read_pair": 1031715, 
            "NRF": 0.987229, 
            "PBC1": 0.987652, 
            "PBC2": 82.408497
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 53015086, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 53015086, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 53015086, 
            "paired_qc_failed": 0, 
            "read1": 26507543, 
            "read1_qc_failed": 0, 
            "read2": 26507543, 
            "read2_qc_failed": 0, 
            "paired_properly": 53015086, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 53015086, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 172245334, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 172245334, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 172245334, 
            "paired_qc_failed": 0, 
            "read1": 86122667, 
            "read1_qc_failed": 0, 
            "read2": 86122667, 
            "read2_qc_failed": 0, 
            "paired_properly": 172245334, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 172245334, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 93972, 
        "Np": 0, 
        "N_opt": 93972, 
        "N_consv": 93972, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -5, 
            "corr_est_frag_len": 0.18318523063571, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.199486, 
            "argmin_corr": 1500, 
            "min_corr": 0.1736801, 
            "NSC": 1.054728, 
            "RSC": 0.3683325
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.31799196852
        }, 
        "rep1-pr1": {
            "FRiP": 0.272217452419
        }, 
        "rep1-pr2": {
            "FRiP": 0.271899772961
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.24860532304
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.24455845741, 
            "auc": 0.494415477761, 
            "ch_div": 0.119740582729, 
            "elbow_pt": 3.31066481958e-275, 
            "jsd": 0.646406023215, 
            "syn_auc": 0.503036052568, 
            "syn_elbow_pt": 0.156207492509, 
            "syn_jsd": 0.328649145732
        }
    ]
}