{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 156015238, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 153691398, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.51, 
            "paired": 156015238, 
            "paired_qc_failed": 0, 
            "read1": 78007619, 
            "read1_qc_failed": 0, 
            "read2": 78007619, 
            "read2_qc_failed": 0, 
            "paired_properly": 152105343, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.49, 
            "with_itself": 152780181, 
            "with_itself_qc_failed": 0, 
            "singletons": 911217, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.58, 
            "diff_chroms": 86761, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 134902134, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132183014, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.98, 
            "paired": 134902134, 
            "paired_qc_failed": 0, 
            "read1": 67451067, 
            "read1_qc_failed": 0, 
            "read2": 67451067, 
            "read2_qc_failed": 0, 
            "paired_properly": 128630862, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.35, 
            "with_itself": 131319824, 
            "with_itself_qc_failed": 0, 
            "singletons": 863190, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.64, 
            "diff_chroms": 216771, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 64839467, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1533587, 
            "paired_opt_dupes": 1677, 
            "dupes_pct": 0.023652
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56502483, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 559124, 
            "paired_opt_dupes": 1089, 
            "dupes_pct": 0.009896
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 64838238, 
            "distinct_read_pairs": 63304683, 
            "one_read_pair": 61819361, 
            "two_read_pair": 1444644, 
            "NRF": 0.976348, 
            "PBC1": 0.976537, 
            "PBC2": 42.792107
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56501008, 
            "distinct_read_pairs": 55941912, 
            "one_read_pair": 55416619, 
            "two_read_pair": 510347, 
            "NRF": 0.990105, 
            "PBC1": 0.99061, 
            "PBC2": 108.586156
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 126611760, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126611760, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 126611760, 
            "paired_qc_failed": 0, 
            "read1": 63305880, 
            "read1_qc_failed": 0, 
            "read2": 63305880, 
            "read2_qc_failed": 0, 
            "paired_properly": 126611760, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 126611760, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 111886718, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 111886718, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 111886718, 
            "paired_qc_failed": 0, 
            "read1": 55943359, 
            "read1_qc_failed": 0, 
            "read2": 55943359, 
            "read2_qc_failed": 0, 
            "paired_properly": 111886718, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 111886718, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 216826, 
        "Np": 0, 
        "N_opt": 216826, 
        "N_consv": 216826, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.183089852681272, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1904429, 
            "argmin_corr": 1500, 
            "min_corr": 0.174918, 
            "NSC": 1.046718, 
            "RSC": 0.5263702
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.405858759203
        }, 
        "rep1-pr1": {
            "FRiP": 0.383155770906
        }, 
        "rep1-pr2": {
            "FRiP": 0.383247486079
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.351963600355
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.221735242988, 
            "auc": 0.496385713497, 
            "ch_div": 0.102060645804, 
            "elbow_pt": 0.0, 
            "jsd": 0.708102834363, 
            "syn_auc": 0.497194660736, 
            "syn_elbow_pt": 0.228841573543, 
            "syn_jsd": 0.380541842114
        }
    ]
}