/cemt/A70096_3_lane_gembs

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SAMPLE A70096_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1099867660 100.00 % 549933830 100.00 % 549933830 100.00 %
General Reads 1037104999 94.29 % 519856852 94.53 % 517248147 94.06 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 56535182 5.14 % 28319722 5.15 % 28215460 5.13 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 6227479 0.57 % 1757256 0.32 % 4470223 0.81 %
Bisulfite_reads C2T 558846234 50.81 % 280021424 50.92 % 278824810 50.70 %
Bisulfite_reads G2A 534793947 48.62 % 268155150 48.76 % 266638797 48.49 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 481483214
Average Unique 87.55 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 64191021571 38.65 % 24970480470 30.07 % 39220541101 47.23 %
Base Counts Overall C 18171721496 10.94 % 841569178 1.01 % 17330152318 20.87 %
Base Counts Overall G 18036079550 10.86 % 17149196644 20.65 % 886882906 1.07 %
Base Counts Overall T 64565120443 38.88 % 39522027542 47.59 % 25043092901 30.16 %
Base Counts Overall N 1116073600 0.67 % 556734496 0.67 % 559339104 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9950267897623964
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 531300945



Mapping Quality

Mapping Quality Histogram
A70096_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A70096_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HG3C3ALXX_4_1
HGJ2KCCXY_7_1
H2CT2CCXY_7_1