/cemt/A70096_3_lane_gembs/H2CT2CCXY_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 508445530 | 100.00 % | 254222765 | 100.00 % | 254222765 | 100.00 % |
| General Reads | 479431863 | 94.29 % | 240252580 | 94.50 % | 239179283 | 94.08 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 26197133 | 5.15 % | 13119296 | 5.16 % | 13077837 | 5.14 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2816534 | 0.55 % | 850889 | 0.33 % | 1965645 | 0.77 % |
| Bisulfite_reads C2T | 258450469 | 50.83 % | 129464687 | 50.93 % | 128985782 | 50.74 % |
| Bisulfite_reads G2A | 247178527 | 48.61 % | 123907189 | 48.74 % | 123271338 | 48.49 % |
| Concept | Value |
|---|---|
| Unique Fragments | 222336571 |
| Average Unique | 87.46 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 29614272899 | 38.57 % | 11529755711 | 30.04 % | 18084517188 | 47.11 % |
| Base Counts Overall C | 8454761130 | 11.01 % | 396347177 | 1.03 % | 8058413953 | 20.99 % |
| Base Counts Overall G | 8367397354 | 10.90 % | 7946320617 | 20.70 % | 421076737 | 1.10 % |
| Base Counts Overall T | 29820073682 | 38.84 % | 18256489015 | 47.56 % | 11563584667 | 30.12 % |
| Base Counts Overall N | 518769965 | 0.68 % | 258724995 | 0.67 % | 260044970 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9945191423556858 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 245527991 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 254222765 |
| 150 | 254222765 |
| Insert Size Histogram |
|---|
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