/cemt/A70096_3_lane_gembs/HG3C3ALXX_4_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 498011568 | 100.00 % | 249005784 | 100.00 % | 249005784 | 100.00 % |
| General Reads | 470141948 | 94.40 % | 235461698 | 94.56 % | 234680250 | 94.25 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 25615816 | 5.14 % | 12822682 | 5.15 % | 12793134 | 5.14 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2253804 | 0.45 % | 721404 | 0.29 % | 1532400 | 0.62 % |
| Bisulfite_reads C2T | 253308798 | 50.86 % | 126821600 | 50.93 % | 126487198 | 50.80 % |
| Bisulfite_reads G2A | 242448966 | 48.68 % | 121462780 | 48.78 % | 120986186 | 48.59 % |
| Concept | Value |
|---|---|
| Unique Fragments | 218782514 |
| Average Unique | 87.86 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 29112779119 | 38.71 % | 11307044474 | 30.07 % | 17805734645 | 47.36 % |
| Base Counts Overall C | 8189073320 | 10.89 % | 376642376 | 1.00 % | 7812430944 | 20.78 % |
| Base Counts Overall G | 8153993428 | 10.84 % | 7761920458 | 20.64 % | 392072970 | 1.04 % |
| Base Counts Overall T | 29240441922 | 38.88 % | 17903140633 | 47.61 % | 11337301289 | 30.15 % |
| Base Counts Overall N | 503458979 | 0.67 % | 251125443 | 0.67 % | 252333536 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9954075095163156 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 241244589 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 249005784 |
| 150 | 249005784 |
| Insert Size Histogram |
|---|
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