/cemt/A70096_3_lane_gembs/HGJ2KCCXY_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 93410562 | 100.00 % | 46705281 | 100.00 % | 46705281 | 100.00 % |
| General Reads | 87531188 | 93.71 % | 44142574 | 94.51 % | 43388614 | 92.90 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4722233 | 5.06 % | 2377744 | 5.09 % | 2344489 | 5.02 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 1157141 | 1.24 % | 184963 | 0.40 % | 972178 | 2.08 % |
| Bisulfite_reads C2T | 47086967 | 50.41 % | 23735137 | 50.82 % | 23351830 | 50.00 % |
| Bisulfite_reads G2A | 45166454 | 48.35 % | 22785181 | 48.79 % | 22381273 | 47.92 % |
| Concept | Value |
|---|---|
| Unique Fragments | 40364129 |
| Average Unique | 86.42 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 5463969553 | 38.74 % | 2133680285 | 30.25 % | 3330289268 | 47.22 % |
| Base Counts Overall C | 1527887046 | 10.83 % | 68579625 | 0.97 % | 1459307421 | 20.69 % |
| Base Counts Overall G | 1514688768 | 10.74 % | 1440955569 | 20.43 % | 73733199 | 1.05 % |
| Base Counts Overall T | 5504604839 | 39.03 % | 3362397894 | 47.68 % | 2142206945 | 30.38 % |
| Base Counts Overall N | 93844656 | 0.67 % | 46884058 | 0.66 % | 46960598 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.99578914594038 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 44528365 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 46705281 |
| 150 | 46705281 |
| Insert Size Histogram |
|---|
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