{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 97653020, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 96897594, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.23, 
            "paired": 97653020, 
            "paired_qc_failed": 0, 
            "read1": 48826510, 
            "read1_qc_failed": 0, 
            "read2": 48826510, 
            "read2_qc_failed": 0, 
            "paired_properly": 96359296, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 98.68, 
            "with_itself": 96605500, 
            "with_itself_qc_failed": 0, 
            "singletons": 292094, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.3, 
            "diff_chroms": 40193, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 153294506, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 151246523, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.66, 
            "paired": 153294506, 
            "paired_qc_failed": 0, 
            "read1": 76647253, 
            "read1_qc_failed": 0, 
            "read2": 76647253, 
            "read2_qc_failed": 0, 
            "paired_properly": 146129190, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.33, 
            "with_itself": 150686641, 
            "with_itself_qc_failed": 0, 
            "singletons": 559882, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.37, 
            "diff_chroms": 216394, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 42565669, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 653632, 
            "paired_opt_dupes": 3392, 
            "dupes_pct": 0.015356
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 65216723, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 700633, 
            "paired_opt_dupes": 4831, 
            "dupes_pct": 0.010743
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42555889, 
            "distinct_read_pairs": 41902684, 
            "one_read_pair": 41263302, 
            "two_read_pair": 627710, 
            "NRF": 0.984651, 
            "PBC1": 0.984741, 
            "PBC2": 65.736251
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 65207286, 
            "distinct_read_pairs": 64507476, 
            "one_read_pair": 63842648, 
            "two_read_pair": 647041, 
            "NRF": 0.989268, 
            "PBC1": 0.989694, 
            "PBC2": 98.668628
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 83824074, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 83824074, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 83824074, 
            "paired_qc_failed": 0, 
            "read1": 41912037, 
            "read1_qc_failed": 0, 
            "read2": 41912037, 
            "read2_qc_failed": 0, 
            "paired_properly": 83824074, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 83824074, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 129032180, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 129032180, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 129032180, 
            "paired_qc_failed": 0, 
            "read1": 64516090, 
            "read1_qc_failed": 0, 
            "read2": 64516090, 
            "read2_qc_failed": 0, 
            "paired_properly": 129032180, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 129032180, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 201256, 
        "Np": 0, 
        "N_opt": 201256, 
        "N_consv": 201256, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.181385985153186, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1809455, 
            "argmin_corr": 1500, 
            "min_corr": 0.1747594, 
            "NSC": 1.037918, 
            "RSC": 1.07121
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.272656794491
        }, 
        "rep1-pr1": {
            "FRiP": 0.25276614739
        }, 
        "rep1-pr2": {
            "FRiP": 0.252863110153
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.164910653456
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.22858522622, 
            "auc": 0.495559064805, 
            "ch_div": 0.160236866675, 
            "elbow_pt": 0.0, 
            "jsd": 0.597964402026, 
            "syn_auc": 0.498183465996, 
            "syn_elbow_pt": 0.164978112943, 
            "syn_jsd": 0.347799739871
        }
    ]
}