{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 112875950, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 107588211, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.32, 
            "paired": 112875950, 
            "paired_qc_failed": 0, 
            "read1": 56437975, 
            "read1_qc_failed": 0, 
            "read2": 56437975, 
            "read2_qc_failed": 0, 
            "paired_properly": 105234297, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.23, 
            "with_itself": 106476669, 
            "with_itself_qc_failed": 0, 
            "singletons": 1111542, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.98, 
            "diff_chroms": 107226, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 153294506, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 151246523, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.66, 
            "paired": 153294506, 
            "paired_qc_failed": 0, 
            "read1": 76647253, 
            "read1_qc_failed": 0, 
            "read2": 76647253, 
            "read2_qc_failed": 0, 
            "paired_properly": 146129368, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.33, 
            "with_itself": 150686641, 
            "with_itself_qc_failed": 0, 
            "singletons": 559882, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.37, 
            "diff_chroms": 216434, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 36897052, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1216281, 
            "paired_opt_dupes": 2955, 
            "dupes_pct": 0.032964
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 65217526, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 700331, 
            "paired_opt_dupes": 4833, 
            "dupes_pct": 0.010738
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36879529, 
            "distinct_read_pairs": 35664569, 
            "one_read_pair": 34622551, 
            "two_read_pair": 981761, 
            "NRF": 0.967056, 
            "PBC1": 0.970783, 
            "PBC2": 35.265763
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 65208114, 
            "distinct_read_pairs": 64508607, 
            "one_read_pair": 63843789, 
            "two_read_pair": 647085, 
            "NRF": 0.989273, 
            "PBC1": 0.989694, 
            "PBC2": 98.663683
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 71361542, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71361542, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 71361542, 
            "paired_qc_failed": 0, 
            "read1": 35680771, 
            "read1_qc_failed": 0, 
            "read2": 35680771, 
            "read2_qc_failed": 0, 
            "paired_properly": 71361542, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 71361542, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 129034390, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 129034390, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 129034390, 
            "paired_qc_failed": 0, 
            "read1": 64517195, 
            "read1_qc_failed": 0, 
            "read2": 64517195, 
            "read2_qc_failed": 0, 
            "paired_properly": 129034390, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 129034390, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 176093, 
        "Np": 0, 
        "N_opt": 176093, 
        "N_consv": 176093, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.205598421492143, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2285643, 
            "argmin_corr": 1500, 
            "min_corr": 0.1827357, 
            "NSC": 1.125114, 
            "RSC": 0.4988746
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.519132867717
        }, 
        "rep1-pr1": {
            "FRiP": 0.49545145224
        }, 
        "rep1-pr2": {
            "FRiP": 0.495617583501
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.473672414949
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.159436163295, 
            "auc": 0.495189503736, 
            "ch_div": 0.174765783381, 
            "elbow_pt": 0.0, 
            "jsd": 0.745860473671, 
            "syn_auc": 0.501517997621, 
            "syn_elbow_pt": 0.318157045398, 
            "syn_jsd": 0.465873751816
        }
    ]
}