/cemt/A70097_2_lane_gembs

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SAMPLE A70097_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1020269266 100.00 % 510134633 100.00 % 510134633 100.00 %
General Reads 956630794 93.76 % 479569103 94.01 % 477061691 93.52 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 57831153 5.67 % 28967329 5.68 % 28863824 5.66 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 5807319 0.57 % 1598201 0.31 % 4209118 0.83 %
Bisulfite_reads C2T 518544155 50.82 % 259846727 50.94 % 258697428 50.71 %
Bisulfite_reads G2A 495917792 48.61 % 248689705 48.75 % 247228087 48.46 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 449343226
Average Unique 88.08 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59543898715 38.65 % 23198680312 30.12 % 36345218403 47.18 %
Base Counts Overall C 16852517397 10.94 % 781712921 1.01 % 16070804476 20.86 %
Base Counts Overall G 16736821732 10.86 % 15909781483 20.65 % 827040249 1.07 %
Base Counts Overall T 59893382631 38.88 % 36623835143 47.54 % 23269547488 30.21 %
Base Counts Overall N 1034038691 0.67 % 516319724 0.67 % 517718967 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9954874079113956
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 495499699



Mapping Quality

Mapping Quality Histogram
A70097_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A70097_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
H2CT2CCXY_8_1
HG3C3ALXX_5_1