/CEMT/A56418_3_lane_gembs

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SAMPLE A56418_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1257382486 100.00 % 628691243 100.00 % 628691243 100.00 %
General Reads 1032207401 82.09 % 519670736 82.66 % 512536665 81.52 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 210415525 16.73 % 105727939 16.82 % 104687586 16.65 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 14759560 1.17 % 3292568 0.52 % 11466992 1.82 %
Bisulfite_reads C2T 622107736 49.48 % 313048729 49.79 % 309059007 49.16 %
Bisulfite_reads G2A 620515190 49.35 % 312349946 49.68 % 308165244 49.02 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 553604282
Average Unique 88.06 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 74325997692 39.15 % 32559375370 34.30 % 41766622322 44.00 %
Base Counts Overall C 19700794327 10.38 % 574894784 0.61 % 19125899543 20.15 %
Base Counts Overall G 20130049307 10.60 % 19127089198 20.15 % 1002960109 1.06 %
Base Counts Overall T 74431228069 39.20 % 42034969824 44.28 % 32396258245 34.13 %
Base Counts Overall N 1276685991 0.67 % 636048517 0.67 % 640637474 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.98764940439712
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 601932926



Mapping Quality

Mapping Quality Histogram
A56418_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A56418_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNHLALXX_2_1
HGJ2KCCXY_5_1
H3CL2ALXX_8_1