/cemt/A75618_1_lane_gembs

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SAMPLE A75618_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1014498774 100.00 % 507249387 100.00 % 507249387 100.00 %
General Reads 998726505 98.45 % 501666372 98.90 % 497060133 97.99 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 7522006 0.74 % 3773862 0.74 % 3748144 0.74 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8250263 0.81 % 1809153 0.36 % 6441110 1.27 %
Bisulfite_reads C2T 513281453 50.59 % 257678210 50.80 % 255603243 50.39 %
Bisulfite_reads G2A 492967058 48.59 % 247762024 48.84 % 245205034 48.34 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 441590885
Average Unique 87.06 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59449959615 38.81 % 24002620160 31.34 % 35447339455 46.28 %
Base Counts Overall C 16268489118 10.62 % 642562014 0.84 % 15625927104 20.40 %
Base Counts Overall G 16144761945 10.54 % 15390736887 20.09 % 754025058 0.98 %
Base Counts Overall T 60294685812 39.36 % 36042323088 47.06 % 24252362724 31.66 %
Base Counts Overall N 1031418384 0.67 % 516415288 0.67 % 515003096 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9947752886880845
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 488327873



Mapping Quality

Mapping Quality Histogram
A75618_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A75618_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNMNALXX_2_1