{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 161086910, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 159115788, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.78, 
            "paired": 161086910, 
            "paired_qc_failed": 0, 
            "read1": 80543455, 
            "read1_qc_failed": 0, 
            "read2": 80543455, 
            "read2_qc_failed": 0, 
            "paired_properly": 157813605, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.97, 
            "with_itself": 158300635, 
            "with_itself_qc_failed": 0, 
            "singletons": 815153, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.51, 
            "diff_chroms": 63568, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 116197260, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 114125531, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.22, 
            "paired": 116197260, 
            "paired_qc_failed": 0, 
            "read1": 58098630, 
            "read1_qc_failed": 0, 
            "read2": 58098630, 
            "read2_qc_failed": 0, 
            "paired_properly": 111936342, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.33, 
            "with_itself": 113460777, 
            "with_itself_qc_failed": 0, 
            "singletons": 664754, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.57, 
            "diff_chroms": 109989, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 68466122, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3565747, 
            "paired_opt_dupes": 2373, 
            "dupes_pct": 0.05208
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 49424273, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 404585, 
            "paired_opt_dupes": 1429, 
            "dupes_pct": 0.008186
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 68462987, 
            "distinct_read_pairs": 64897445, 
            "one_read_pair": 61496041, 
            "two_read_pair": 3247582, 
            "NRF": 0.94792, 
            "PBC1": 0.947588, 
            "PBC2": 18.935947
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 49418586, 
            "distinct_read_pairs": 49014360, 
            "one_read_pair": 48629916, 
            "two_read_pair": 376015, 
            "NRF": 0.99182, 
            "PBC1": 0.992157, 
            "PBC2": 129.329724
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 129800750, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 129800750, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 129800750, 
            "paired_qc_failed": 0, 
            "read1": 64900375, 
            "read1_qc_failed": 0, 
            "read2": 64900375, 
            "read2_qc_failed": 0, 
            "paired_properly": 129800750, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 129800750, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 98039376, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 98039376, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 98039376, 
            "paired_qc_failed": 0, 
            "read1": 49019688, 
            "read1_qc_failed": 0, 
            "read2": 49019688, 
            "read2_qc_failed": 0, 
            "paired_properly": 98039376, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 98039376, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 227988, 
        "Np": 0, 
        "N_opt": 227988, 
        "N_consv": 227988, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.183037574732989, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1873348, 
            "argmin_corr": 1500, 
            "min_corr": 0.1756669, 
            "NSC": 1.041958, 
            "RSC": 0.6317037
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.249860988362
        }, 
        "rep1-pr1": {
            "FRiP": 0.258779113088
        }, 
        "rep1-pr2": {
            "FRiP": 0.258635239933
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.173929808391
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.241626211379, 
            "auc": 0.496431256932, 
            "ch_div": 0.113059002517, 
            "elbow_pt": 0.0, 
            "jsd": 0.603341869936, 
            "syn_auc": 0.496923526564, 
            "syn_elbow_pt": 0.162414430105, 
            "syn_jsd": 0.346368913389
        }
    ]
}