/cemt/A75619_1_lane_gembs

BACK

SAMPLE A75619_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1009002876 100.00 % 504501438 100.00 % 504501438 100.00 %
General Reads 994106149 98.52 % 499666825 99.04 % 494439324 98.01 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 5949510 0.59 % 2986780 0.59 % 2962730 0.59 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8947217 0.89 % 1847833 0.37 % 7099384 1.41 %
Bisulfite_reads C2T 510402989 50.58 % 256392314 50.82 % 254010675 50.35 %
Bisulfite_reads G2A 489652670 48.53 % 246261291 48.81 % 243391379 48.24 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 438559904
Average Unique 86.93 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59199044276 38.85 % 24020530469 31.53 % 35178513807 46.18 %
Base Counts Overall C 16077296499 10.55 % 589791340 0.77 % 15487505159 20.33 %
Base Counts Overall G 15955686405 10.47 % 15216115994 19.97 % 739570411 0.97 %
Base Counts Overall T 60076395171 39.43 % 35843063128 47.05 % 24233332043 31.81 %
Base Counts Overall N 1051011925 0.69 % 510216207 0.67 % 540795718 0.71 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9946485682816826
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 485290685



Mapping Quality

Mapping Quality Histogram
A75619_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A75619_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNMNALXX_3_1