/cemt/A75619_1_lane_gembs/HKNMNALXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1009002876 | 100.00 % | 504501438 | 100.00 % | 504501438 | 100.00 % |
| General Reads | 994106149 | 98.52 % | 499666825 | 99.04 % | 494439324 | 98.01 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5949510 | 0.59 % | 2986780 | 0.59 % | 2962730 | 0.59 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8947217 | 0.89 % | 1847833 | 0.37 % | 7099384 | 1.41 % |
| Bisulfite_reads C2T | 510402989 | 50.58 % | 256392314 | 50.82 % | 254010675 | 50.35 % |
| Bisulfite_reads G2A | 489652670 | 48.53 % | 246261291 | 48.81 % | 243391379 | 48.24 % |
| Concept | Value |
|---|---|
| Unique Fragments | 438559904 |
| Average Unique | 86.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 59199044276 | 38.85 % | 24020530469 | 31.53 % | 35178513807 | 46.18 % |
| Base Counts Overall C | 16077296499 | 10.55 % | 589791340 | 0.77 % | 15487505159 | 20.33 % |
| Base Counts Overall G | 15955686405 | 10.47 % | 15216115994 | 19.97 % | 739570411 | 0.97 % |
| Base Counts Overall T | 60076395171 | 39.43 % | 35843063128 | 47.05 % | 24233332043 | 31.81 % |
| Base Counts Overall N | 1051011925 | 0.69 % | 510216207 | 0.67 % | 540795718 | 0.71 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9946485682816826 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 485290685 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 504501438 |
| 150 | 504501438 |
| Insert Size Histogram |
|---|
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