{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 125251832, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 124373301, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.3, 
            "paired": 125251832, 
            "paired_qc_failed": 0, 
            "read1": 62625916, 
            "read1_qc_failed": 0, 
            "read2": 62625916, 
            "read2_qc_failed": 0, 
            "paired_properly": 119468616, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.38, 
            "with_itself": 123795893, 
            "with_itself_qc_failed": 0, 
            "singletons": 577408, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.46, 
            "diff_chroms": 79186, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 103857894, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 102353291, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.55, 
            "paired": 103857894, 
            "paired_qc_failed": 0, 
            "read1": 51928947, 
            "read1_qc_failed": 0, 
            "read2": 51928947, 
            "read2_qc_failed": 0, 
            "paired_properly": 100340149, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.61, 
            "with_itself": 101801899, 
            "with_itself_qc_failed": 0, 
            "singletons": 551392, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.53, 
            "diff_chroms": 131984, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 55966482, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2780790, 
            "paired_opt_dupes": 971, 
            "dupes_pct": 0.049687
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44269160, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 406091, 
            "paired_opt_dupes": 1054, 
            "dupes_pct": 0.009173
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 55965709, 
            "distinct_read_pairs": 53184928, 
            "one_read_pair": 50885421, 
            "two_read_pair": 1969592, 
            "NRF": 0.950313, 
            "PBC1": 0.956764, 
            "PBC2": 25.835514
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44267990, 
            "distinct_read_pairs": 43861911, 
            "one_read_pair": 43470849, 
            "two_read_pair": 382881, 
            "NRF": 0.990827, 
            "PBC1": 0.991084, 
            "PBC2": 113.536187
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 106371384, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 106371384, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 106371384, 
            "paired_qc_failed": 0, 
            "read1": 53185692, 
            "read1_qc_failed": 0, 
            "read2": 53185692, 
            "read2_qc_failed": 0, 
            "paired_properly": 106371384, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 106371384, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 87726138, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 87726138, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 87726138, 
            "paired_qc_failed": 0, 
            "read1": 43863069, 
            "read1_qc_failed": 0, 
            "read2": 43863069, 
            "read2_qc_failed": 0, 
            "paired_properly": 87726138, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 87726138, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 168370, 
        "Np": 0, 
        "N_opt": 168370, 
        "N_consv": 168370, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.244395343539406, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2002999, 
            "argmin_corr": 1500, 
            "min_corr": 0.1815599, 
            "NSC": 1.346087, 
            "RSC": 3.353016
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.686090353823
        }, 
        "rep1-pr1": {
            "FRiP": 0.68307118704
        }, 
        "rep1-pr2": {
            "FRiP": 0.68305948008
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.66691559995
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.09651374117, 
            "auc": 0.496065072875, 
            "ch_div": 0.21011215738, 
            "elbow_pt": 0.0, 
            "jsd": 0.842631799916, 
            "syn_auc": 0.504125599785, 
            "syn_elbow_pt": 0.47639126137, 
            "syn_jsd": 0.599733893724
        }
    ]
}