{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 59288790, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58815164, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.2, 
            "paired": 59288790, 
            "paired_qc_failed": 0, 
            "read1": 29644395, 
            "read1_qc_failed": 0, 
            "read2": 29644395, 
            "read2_qc_failed": 0, 
            "paired_properly": 57680842, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.29, 
            "with_itself": 58522957, 
            "with_itself_qc_failed": 0, 
            "singletons": 292207, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.49, 
            "diff_chroms": 29462, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 103857894, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 102353291, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.55, 
            "paired": 103857894, 
            "paired_qc_failed": 0, 
            "read1": 51928947, 
            "read1_qc_failed": 0, 
            "read2": 51928947, 
            "read2_qc_failed": 0, 
            "paired_properly": 100340149, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.61, 
            "with_itself": 101801899, 
            "with_itself_qc_failed": 0, 
            "singletons": 551392, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.53, 
            "diff_chroms": 131984, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 26899935, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2794593, 
            "paired_opt_dupes": 351, 
            "dupes_pct": 0.103888
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44269160, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 406091, 
            "paired_opt_dupes": 1054, 
            "dupes_pct": 0.009173
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26898443, 
            "distinct_read_pairs": 24103869, 
            "one_read_pair": 22295436, 
            "two_read_pair": 1337587, 
            "NRF": 0.896106, 
            "PBC1": 0.924973, 
            "PBC2": 16.668401
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44267990, 
            "distinct_read_pairs": 43861911, 
            "one_read_pair": 43470849, 
            "two_read_pair": 382881, 
            "NRF": 0.990827, 
            "PBC1": 0.991084, 
            "PBC2": 113.536187
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 48210684, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48210684, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 48210684, 
            "paired_qc_failed": 0, 
            "read1": 24105342, 
            "read1_qc_failed": 0, 
            "read2": 24105342, 
            "read2_qc_failed": 0, 
            "paired_properly": 48210684, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 48210684, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 87726138, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 87726138, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 87726138, 
            "paired_qc_failed": 0, 
            "read1": 43863069, 
            "read1_qc_failed": 0, 
            "read2": 43863069, 
            "read2_qc_failed": 0, 
            "paired_properly": 87726138, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 87726138, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 68131, 
        "Np": 0, 
        "N_opt": 68131, 
        "N_consv": 68131, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.366364323549954, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.2094251, 
            "argmin_corr": 1500, 
            "min_corr": 0.1275895, 
            "NSC": 2.871431, 
            "RSC": 2.917737
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.766149388714
        }, 
        "rep1-pr1": {
            "FRiP": 0.758093285435
        }, 
        "rep1-pr2": {
            "FRiP": 0.758240378681
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.754146357168
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.054917768547, 
            "auc": 0.494146310772, 
            "ch_div": 0.375889417358, 
            "elbow_pt": 2.59822124338e-250, 
            "jsd": 0.928028917185, 
            "syn_auc": 0.510071432601, 
            "syn_elbow_pt": 0.609188059365, 
            "syn_jsd": 0.688587389047
        }
    ]
}
