/CEMT/A75620_1_lane_gembs

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SAMPLE A75620_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1027075254 100.00 % 513537627 100.00 % 513537627 100.00 %
General Reads 1008047003 98.15 % 507136659 98.75 % 500910344 97.54 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 7590404 0.74 % 3815925 0.74 % 3774479 0.73 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 11437847 1.11 % 2585043 0.50 % 8852804 1.72 %
Bisulfite_reads C2T 519503747 50.58 % 261196977 50.86 % 258306770 50.30 %
Bisulfite_reads G2A 496133660 48.31 % 249755607 48.63 % 246378053 47.98 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 445295312
Average Unique 86.71 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59977754343 38.67 % 24563106983 31.68 % 35414647360 45.67 %
Base Counts Overall C 16697736670 10.77 % 669122400 0.86 % 16028614270 20.67 %
Base Counts Overall G 16484616743 10.63 % 15660388901 20.20 % 824227842 1.06 %
Base Counts Overall T 60876320601 39.25 % 36128299667 46.59 % 24748020934 31.91 %
Base Counts Overall N 1051934997 0.68 % 523263726 0.67 % 528671271 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9933916557823222
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 493604033



Mapping Quality

Mapping Quality Histogram
A75620_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A75620_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNMNALXX_4_2