{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 104415760, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 103816876, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.43, 
            "paired": 104415760, 
            "paired_qc_failed": 0, 
            "read1": 52207880, 
            "read1_qc_failed": 0, 
            "read2": 52207880, 
            "read2_qc_failed": 0, 
            "paired_properly": 103508855, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 99.13, 
            "with_itself": 103586642, 
            "with_itself_qc_failed": 0, 
            "singletons": 230234, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.22, 
            "diff_chroms": 16920, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 208397864, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 205001725, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.37, 
            "paired": 208397864, 
            "paired_qc_failed": 0, 
            "read1": 104198932, 
            "read1_qc_failed": 0, 
            "read2": 104198932, 
            "read2_qc_failed": 0, 
            "paired_properly": 199305552, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.64, 
            "with_itself": 203636967, 
            "with_itself_qc_failed": 0, 
            "singletons": 1364758, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.65, 
            "diff_chroms": 299406, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 49301725, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2676766, 
            "paired_opt_dupes": 1847, 
            "dupes_pct": 0.054294
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 87961925, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1539621, 
            "paired_opt_dupes": 2337, 
            "dupes_pct": 0.017503
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 49299263, 
            "distinct_read_pairs": 46622586, 
            "one_read_pair": 44590608, 
            "two_read_pair": 1686540, 
            "NRF": 0.945706, 
            "PBC1": 0.956416, 
            "PBC2": 26.439105
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 87957322, 
            "distinct_read_pairs": 86418077, 
            "one_read_pair": 84991683, 
            "two_read_pair": 1357144, 
            "NRF": 0.9825, 
            "PBC1": 0.983494, 
            "PBC2": 62.625398
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 93249918, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 93249918, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 93249918, 
            "paired_qc_failed": 0, 
            "read1": 46624959, 
            "read1_qc_failed": 0, 
            "read2": 46624959, 
            "read2_qc_failed": 0, 
            "paired_properly": 93249918, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 93249918, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 172844608, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 172844608, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 172844608, 
            "paired_qc_failed": 0, 
            "read1": 86422304, 
            "read1_qc_failed": 0, 
            "read2": 86422304, 
            "read2_qc_failed": 0, 
            "paired_properly": 172844608, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 172844608, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 124907, 
        "Np": 0, 
        "N_opt": 124907, 
        "N_consv": 124907, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.304892685746973, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.2245583, 
            "argmin_corr": 1500, 
            "min_corr": 0.1858368, 
            "NSC": 1.640647, 
            "RSC": 3.07467
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.759198369992
        }, 
        "rep1-pr1": {
            "FRiP": 0.748312909826
        }, 
        "rep1-pr2": {
            "FRiP": 0.748370574945
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.738534381012
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0645203137491, 
            "auc": 0.495793588946, 
            "ch_div": 0.319077901749, 
            "elbow_pt": 0.0, 
            "jsd": 0.870201736481, 
            "syn_auc": 0.501452260973, 
            "syn_elbow_pt": 0.562338802438, 
            "syn_jsd": 0.656647446918
        }
    ]
}