/cemt/A83590_2_lane_gembs/HGCV2CCXY_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 210025724 | 100.00 % | 105012862 | 100.00 % | 105012862 | 100.00 % |
| General Reads | 207400494 | 98.75 % | 104550840 | 99.56 % | 102849654 | 97.94 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10540 | 0.01 % | 5296 | 0.01 % | 5244 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2614690 | 1.24 % | 456726 | 0.43 % | 2157964 | 2.05 % |
| Bisulfite_reads C2T | 105570531 | 50.27 % | 53171337 | 50.63 % | 52399194 | 49.90 % |
| Bisulfite_reads G2A | 101840503 | 48.49 % | 51384799 | 48.93 % | 50455704 | 48.05 % |
| Concept | Value |
|---|---|
| Unique Fragments | 87777210 |
| Average Unique | 83.59 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 12376486110 | 39.03 % | 5849718087 | 36.89 % | 6526768023 | 41.16 % |
| Base Counts Overall C | 3360566946 | 10.60 % | 139225735 | 0.88 % | 3221341211 | 20.32 % |
| Base Counts Overall G | 3385776670 | 10.68 % | 3224914444 | 20.34 % | 160862226 | 1.01 % |
| Base Counts Overall T | 12378683043 | 39.03 % | 6537516753 | 41.23 % | 5841166290 | 36.84 % |
| Base Counts Overall N | 212371555 | 0.67 % | 105567143 | 0.67 % | 106804412 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9915787549627615 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 99186150 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 105012862 |
| 150 | 105012862 |
| Insert Size Histogram |
|---|
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