{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 91400730, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 90721731, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.26, 
            "paired": 91400730, 
            "paired_qc_failed": 0, 
            "read1": 45700365, 
            "read1_qc_failed": 0, 
            "read2": 45700365, 
            "read2_qc_failed": 0, 
            "paired_properly": 90363210, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 98.86, 
            "with_itself": 90419644, 
            "with_itself_qc_failed": 0, 
            "singletons": 302087, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.33, 
            "diff_chroms": 14031, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 196505800, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 193483775, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.46, 
            "paired": 196505800, 
            "paired_qc_failed": 0, 
            "read1": 98252900, 
            "read1_qc_failed": 0, 
            "read2": 98252900, 
            "read2_qc_failed": 0, 
            "paired_properly": 182597399, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.92, 
            "with_itself": 192397679, 
            "with_itself_qc_failed": 0, 
            "singletons": 1086096, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.55, 
            "diff_chroms": 243413, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 42745137, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2750360, 
            "paired_opt_dupes": 2913, 
            "dupes_pct": 0.064343
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 81193783, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 858603, 
            "paired_opt_dupes": 4308, 
            "dupes_pct": 0.010575
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42744352, 
            "distinct_read_pairs": 39994023, 
            "one_read_pair": 37520618, 
            "two_read_pair": 2278612, 
            "NRF": 0.935656, 
            "PBC1": 0.938156, 
            "PBC2": 16.466436
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81187332, 
            "distinct_read_pairs": 80329098, 
            "one_read_pair": 79518226, 
            "two_read_pair": 792113, 
            "NRF": 0.989429, 
            "PBC1": 0.989906, 
            "PBC2": 100.387478
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 79989554, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 79989554, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 79989554, 
            "paired_qc_failed": 0, 
            "read1": 39994777, 
            "read1_qc_failed": 0, 
            "read2": 39994777, 
            "read2_qc_failed": 0, 
            "paired_properly": 79989554, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 79989554, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 160670360, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 160670360, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 160670360, 
            "paired_qc_failed": 0, 
            "read1": 80335180, 
            "read1_qc_failed": 0, 
            "read2": 80335180, 
            "read2_qc_failed": 0, 
            "paired_properly": 160670360, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 160670360, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 134733, 
        "Np": 0, 
        "N_opt": 134733, 
        "N_consv": 134733, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.237521562883716, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.1986862, 
            "argmin_corr": 1500, 
            "min_corr": 0.1791903, 
            "NSC": 1.325527, 
            "RSC": 2.991968
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.640794993752
        }, 
        "rep1-pr1": {
            "FRiP": 0.612555010091
        }, 
        "rep1-pr2": {
            "FRiP": 0.612539963471
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.603588160982
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.115721286296, 
            "auc": 0.495467265729, 
            "ch_div": 0.187816883387, 
            "elbow_pt": 0.0, 
            "jsd": 0.827191593494, 
            "syn_auc": 0.50525422804, 
            "syn_elbow_pt": 0.462883522461, 
            "syn_jsd": 0.561666645725
        }
    ]
}