{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 145394868, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 143719398, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.85, 
            "paired": 145394868, 
            "paired_qc_failed": 0, 
            "read1": 72697434, 
            "read1_qc_failed": 0, 
            "read2": 72697434, 
            "read2_qc_failed": 0, 
            "paired_properly": 142615396, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 98.09, 
            "with_itself": 142957705, 
            "with_itself_qc_failed": 0, 
            "singletons": 761693, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.52, 
            "diff_chroms": 50309, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 196505800, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 193483775, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.46, 
            "paired": 196505800, 
            "paired_qc_failed": 0, 
            "read1": 98252900, 
            "read1_qc_failed": 0, 
            "read2": 98252900, 
            "read2_qc_failed": 0, 
            "paired_properly": 182597399, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.92, 
            "with_itself": 192397679, 
            "with_itself_qc_failed": 0, 
            "singletons": 1086096, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.55, 
            "diff_chroms": 243413, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 63402084, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2491130, 
            "paired_opt_dupes": 3943, 
            "dupes_pct": 0.039291
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 81193783, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 858603, 
            "paired_opt_dupes": 4308, 
            "dupes_pct": 0.010575
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 63399081, 
            "distinct_read_pairs": 60908122, 
            "one_read_pair": 58513478, 
            "two_read_pair": 2306565, 
            "NRF": 0.96071, 
            "PBC1": 0.960684, 
            "PBC2": 25.368233
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81187332, 
            "distinct_read_pairs": 80329098, 
            "one_read_pair": 79518226, 
            "two_read_pair": 792113, 
            "NRF": 0.989429, 
            "PBC1": 0.989906, 
            "PBC2": 100.387478
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 121821908, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 121821908, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 121821908, 
            "paired_qc_failed": 0, 
            "read1": 60910954, 
            "read1_qc_failed": 0, 
            "read2": 60910954, 
            "read2_qc_failed": 0, 
            "paired_properly": 121821908, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 121821908, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 160670360, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 160670360, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 160670360, 
            "paired_qc_failed": 0, 
            "read1": 80335180, 
            "read1_qc_failed": 0, 
            "read2": 80335180, 
            "read2_qc_failed": 0, 
            "paired_properly": 160670360, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 160670360, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 228527, 
        "Np": 0, 
        "N_opt": 228527, 
        "N_consv": 228527, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.186524101732512, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1873855, 
            "argmin_corr": 1500, 
            "min_corr": 0.1794298, 
            "NSC": 1.039538, 
            "RSC": 0.891721
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.379365873066
        }, 
        "rep1-pr1": {
            "FRiP": 0.332425370134
        }, 
        "rep1-pr2": {
            "FRiP": 0.332102057985
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.288148192915
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.214795455431, 
            "auc": 0.496314524618, 
            "ch_div": 0.147011899621, 
            "elbow_pt": 0.0, 
            "jsd": 0.621313356685, 
            "syn_auc": 0.502902389689, 
            "syn_elbow_pt": 0.228385103424, 
            "syn_jsd": 0.380331786204
        }
    ]
}