/cemt/A83592_2_lane_gembs/HFJM5CCXY_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 948992430 | 100.00 % | 474496215 | 100.00 % | 474496215 | 100.00 % |
| General Reads | 817637340 | 86.16 % | 411184204 | 86.66 % | 406453136 | 85.66 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3493017 | 0.37 % | 1753855 | 0.37 % | 1739162 | 0.37 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 127862073 | 13.47 % | 61558156 | 12.97 % | 66303917 | 13.97 % |
| Bisulfite_reads C2T | 418147482 | 44.06 % | 210197208 | 44.30 % | 207950274 | 43.83 % |
| Bisulfite_reads G2A | 402982875 | 42.46 % | 202740851 | 42.73 % | 200242024 | 42.20 % |
| Concept | Value |
|---|---|
| Unique Fragments | 359602556 |
| Average Unique | 75.79 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 53718467886 | 37.49 % | 23250330961 | 32.45 % | 30468136925 | 42.52 % |
| Base Counts Overall C | 17197180314 | 12.00 % | 2540353652 | 3.55 % | 14656826662 | 20.46 % |
| Base Counts Overall G | 17351148020 | 12.11 % | 14645832171 | 20.44 % | 2705315849 | 3.78 % |
| Base Counts Overall T | 54065602436 | 37.73 % | 30732775801 | 42.89 % | 23332826635 | 32.57 % |
| Base Counts Overall N | 965458274 | 0.67 % | 479635880 | 0.67 % | 485822394 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9856761367695965 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 398239932 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 474496215 |
| 150 | 474496215 |
| Insert Size Histogram |
|---|
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