/cemt/A83593_2_lane_gembs/HFJM5CCXY_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 949826878 | 100.00 % | 474913439 | 100.00 % | 474913439 | 100.00 % |
| General Reads | 811065619 | 85.39 % | 408376318 | 85.99 % | 402689301 | 84.79 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 146215 | 0.02 % | 73456 | 0.02 % | 72759 | 0.02 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 138615044 | 14.59 % | 66463665 | 13.99 % | 72151379 | 15.19 % |
| Bisulfite_reads C2T | 413215723 | 43.50 % | 207947233 | 43.79 % | 205268490 | 43.22 % |
| Bisulfite_reads G2A | 397996111 | 41.90 % | 200502541 | 42.22 % | 197493570 | 41.59 % |
| Concept | Value |
|---|---|
| Unique Fragments | 349321013 |
| Average Unique | 73.55 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 53517500915 | 37.31 % | 23844783583 | 33.25 % | 29672717332 | 41.38 % |
| Base Counts Overall C | 17472444839 | 12.18 % | 2733344018 | 3.81 % | 14739100821 | 20.55 % |
| Base Counts Overall G | 17644970419 | 12.30 % | 14751479106 | 20.57 % | 2893491313 | 4.03 % |
| Base Counts Overall T | 53817568076 | 37.52 % | 29901085842 | 41.70 % | 23916482234 | 33.35 % |
| Base Counts Overall N | 971374329 | 0.68 % | 481236740 | 0.67 % | 490137589 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.7454702927816483 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 390085949 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 474913439 |
| 150 | 474913439 |
| Insert Size Histogram |
|---|
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