/cemt/A83593_2_lane_gembs/HGCV2CCXY_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 194195742 | 100.00 % | 97097871 | 100.00 % | 97097871 | 100.00 % |
| General Reads | 191779882 | 98.76 % | 96626057 | 99.51 % | 95153825 | 98.00 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28508 | 0.01 % | 14313 | 0.01 % | 14195 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2387352 | 1.23 % | 457501 | 0.47 % | 1929851 | 1.99 % |
| Bisulfite_reads C2T | 97616288 | 50.27 % | 49153530 | 50.62 % | 48462758 | 49.91 % |
| Bisulfite_reads G2A | 94192102 | 48.50 % | 47486840 | 48.91 % | 46705262 | 48.10 % |
| Concept | Value |
|---|---|
| Unique Fragments | 82357005 |
| Average Unique | 84.82 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11459494651 | 39.08 % | 4983783610 | 33.99 % | 6475711041 | 44.17 % |
| Base Counts Overall C | 3095185907 | 10.56 % | 129147747 | 0.88 % | 2966038160 | 20.23 % |
| Base Counts Overall G | 3114447253 | 10.62 % | 2964191186 | 20.22 % | 150256067 | 1.02 % |
| Base Counts Overall T | 11458060581 | 39.07 % | 6487044785 | 44.24 % | 4971015796 | 33.90 % |
| Base Counts Overall N | 196368650 | 0.67 % | 97611193 | 0.67 % | 98757457 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9933188553862 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 92206727 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 97097871 |
| 150 | 97097871 |
| Insert Size Histogram |
|---|
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