{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 97824887, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 96168851, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 137022219, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126947517, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 87012317, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9284470, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.106703
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 97335408, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 18974757, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.194942
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 87006406, 
            "distinct_read_pairs": 77761253, 
            "one_read_pair": 70573282, 
            "two_read_pair": 5716638, 
            "NRF": 0.893742, 
            "PBC1": 0.907564, 
            "PBC2": 12.345242
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 97207035, 
            "distinct_read_pairs": 79903320, 
            "one_read_pair": 66512142, 
            "two_read_pair": 10301152, 
            "NRF": 0.821991, 
            "PBC1": 0.832408, 
            "PBC2": 6.456767
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 77727847, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77727847, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 78360651, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 78360651, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 53565, 
        "Np": 0, 
        "N_opt": 53565, 
        "N_consv": 53565, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.254036571810277, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.2478316, 
            "argmin_corr": 1500, 
            "min_corr": 0.1919033, 
            "NSC": 1.323774, 
            "RSC": 1.110945
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.326648375373
        }, 
        "rep1-pr1": {
            "FRiP": 0.314269612405
        }, 
        "rep1-pr2": {
            "FRiP": 0.314336336582
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.312903297857
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.217305295865, 
            "auc": 0.4953895838, 
            "ch_div": 0.105856103515, 
            "elbow_pt": 0.0, 
            "jsd": 0.753284324212, 
            "syn_auc": 0.497033263889, 
            "syn_elbow_pt": 0.295030036754, 
            "syn_jsd": 0.413664694474
        }
    ]
}
