/EXTERNAL CREST/K006465_1_lane_gembs/JKU012.Bisulfite-Seq.DNA_Methylation.JGAX00000016044_2

BACK

SAMPLE K006465_1_lane_gembs LANE JKU012.Bisulfite-Seq.DNA_Methylation.JGAX00000016044_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1987639803 100.00 % 1987639803 100.00 % 0 0.00 %
General Reads 1924178037 96.81 % 1924178037 96.81 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 16624361 0.84 % 16624361 0.84 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 46837405 2.36 % 46837405 2.36 % 0 0.00 %
Bisulfite_reads C2T 965729683 48.59 % 965729683 48.59 % 0 0.00 %
Bisulfite_reads G2A 975072715 49.06 % 975072715 49.06 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1466890201
Average Unique 75.58 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 99235810220 48.08 %
Base Counts Overall C 43023415277 20.84 %
Base Counts Overall G 4525376268 2.19 %
Base Counts Overall T 57472168689 27.84 %
Base Counts Overall N 2144239850 1.04 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.884469802092171
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU012.Bisulfite-Seq.DNA_Methylation.JGAX00000016044_2.mapq.png



Read Length

Read Length Reads
108 1055664510
97 931975293