/EXTERNAL KNIH/K006244_1_lane_gembs/KEP20150005.Bisulfite-Seq.DNA_Methylation.EGAX00001529776.IPS05_X
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1332945280 | 100.00 % | 666472640 | 100.00 % | 666472640 | 100.00 % |
| General Reads | 1300501332 | 97.57 % | 655048961 | 98.29 % | 645452371 | 96.85 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7218363 | 0.54 % | 3644553 | 0.55 % | 3573810 | 0.54 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 25225585 | 1.89 % | 7779126 | 1.17 % | 17446459 | 2.62 % |
| Bisulfite_reads C2T | 665115944 | 49.90 % | 334948726 | 50.26 % | 330167218 | 49.54 % |
| Bisulfite_reads G2A | 642603751 | 48.21 % | 323744788 | 48.58 % | 318858963 | 47.84 % |
| Concept | Value |
|---|---|
| Unique Fragments | 394164013 |
| Average Unique | 59.14 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 71595021872 | 35.34 % | 27826419975 | 27.47 % | 43768601897 | 43.21 % |
| Base Counts Overall C | 28433432468 | 14.03 % | 4292079262 | 4.24 % | 24141353206 | 23.83 % |
| Base Counts Overall G | 30949814843 | 15.28 % | 24987414125 | 24.67 % | 5962400718 | 5.89 % |
| Base Counts Overall T | 70277129414 | 34.69 % | 43523919162 | 42.96 % | 26753210252 | 26.41 % |
| Base Counts Overall N | 1352283963 | 0.67 % | 674008756 | 0.67 % | 678275207 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9643533988003306 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 453586438 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 151 | 666472640 |
| 151 | 666472640 |
| Insert Size Histogram |
|---|
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