/EXTERNAL CREST/K006463_1_lane_gembs/COC22.Bisulfite-Seq.DNA_Methylation.JGAX00000012155_2

BACK

SAMPLE K006463_1_lane_gembs LANE COC22.Bisulfite-Seq.DNA_Methylation.JGAX00000012155_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1477314901 100.00 % 1477314901 100.00 % 0 0.00 %
General Reads 1219183188 82.53 % 1219183188 82.53 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 13291432 0.90 % 13291432 0.90 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 244840281 16.57 % 244840281 16.57 % 0 0.00 %
Bisulfite_reads C2T 613667156 41.54 % 613667156 41.54 % 0 0.00 %
Bisulfite_reads G2A 618807464 41.89 % 618807464 41.89 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 924342758
Average Unique 75.00 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 66657854765 44.67 %
Base Counts Overall C 32549991981 21.82 %
Base Counts Overall G 7532316370 5.05 %
Base Counts Overall T 40955538079 27.45 %
Base Counts Overall N 1513103806 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8885815559002768
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC22.Bisulfite-Seq.DNA_Methylation.JGAX00000012155_2.mapq.png



Read Length

Read Length Reads
100 1477314901