{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 110992550, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 103467389, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.22, 
            "paired": 110992550, 
            "paired_qc_failed": 0, 
            "read1": 55496275, 
            "read1_qc_failed": 0, 
            "read2": 55496275, 
            "read2_qc_failed": 0, 
            "paired_properly": 99878697, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.99, 
            "with_itself": 101179634, 
            "with_itself_qc_failed": 0, 
            "singletons": 2287755, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.06, 
            "diff_chroms": 411907, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 202126234, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 198799328, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.35, 
            "paired": 202126234, 
            "paired_qc_failed": 0, 
            "read1": 101063117, 
            "read1_qc_failed": 0, 
            "read2": 101063117, 
            "read2_qc_failed": 0, 
            "paired_properly": 176384044, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.26, 
            "with_itself": 196644255, 
            "with_itself_qc_failed": 0, 
            "singletons": 2155073, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.07, 
            "diff_chroms": 15415697, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 41405308, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 31877276, 
            "paired_opt_dupes": 7959, 
            "dupes_pct": 0.769884
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 72658135, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 9622785, 
            "paired_opt_dupes": 11648, 
            "dupes_pct": 0.132439
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 41399580, 
            "distinct_read_pairs": 9526489, 
            "one_read_pair": 2257021, 
            "two_read_pair": 1455563, 
            "NRF": 0.230111, 
            "PBC1": 0.236921, 
            "PBC2": 1.550617
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 72505168, 
            "distinct_read_pairs": 62908922, 
            "one_read_pair": 54529901, 
            "two_read_pair": 7308755, 
            "NRF": 0.867647, 
            "PBC1": 0.866807, 
            "PBC2": 7.460901
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 19056064, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19056064, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 19056064, 
            "paired_qc_failed": 0, 
            "read1": 9528032, 
            "read1_qc_failed": 0, 
            "read2": 9528032, 
            "read2_qc_failed": 0, 
            "paired_properly": 19056064, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 19056064, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 126070700, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126070700, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 126070700, 
            "paired_qc_failed": 0, 
            "read1": 63035350, 
            "read1_qc_failed": 0, 
            "read2": 63035350, 
            "read2_qc_failed": 0, 
            "paired_properly": 126070700, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 126070700, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 52465, 
        "Np": 0, 
        "N_opt": 52465, 
        "N_consv": 52465, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.10031396837687, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.0977704, 
            "argmin_corr": 1500, 
            "min_corr": 0.09013564, 
            "NSC": 1.112922, 
            "RSC": 1.333157
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.148215727746
        }, 
        "rep1-pr1": {
            "FRiP": 0.203787124114
        }, 
        "rep1-pr2": {
            "FRiP": 0.203023611639
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0523790559145
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.230058410408, 
            "auc": 0.488574629816, 
            "ch_div": 0.251727826148, 
            "elbow_pt": 8.4851640826e-65, 
            "jsd": 0.613690660642, 
            "syn_auc": 0.503325918946, 
            "syn_elbow_pt": 0.148180927918, 
            "syn_jsd": 0.264493369145
        }
    ]
}
