{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 250417174, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 243252006, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.14, 
            "paired": 250417174, 
            "paired_qc_failed": 0, 
            "read1": 125208587, 
            "read1_qc_failed": 0, 
            "read2": 125208587, 
            "read2_qc_failed": 0, 
            "paired_properly": 238565808, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.27, 
            "with_itself": 241326571, 
            "with_itself_qc_failed": 0, 
            "singletons": 1925435, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.77, 
            "diff_chroms": 1507639, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 216279744, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 212268741, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.15, 
            "paired": 216279744, 
            "paired_qc_failed": 0, 
            "read1": 108139872, 
            "read1_qc_failed": 0, 
            "read2": 108139872, 
            "read2_qc_failed": 0, 
            "paired_properly": 208007441, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.18, 
            "with_itself": 210903306, 
            "with_itself_qc_failed": 0, 
            "singletons": 1365435, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.63, 
            "diff_chroms": 1643621, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 97372855, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 7755361, 
            "paired_opt_dupes": 32812, 
            "dupes_pct": 0.079646
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 86702361, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3631684, 
            "paired_opt_dupes": 20901, 
            "dupes_pct": 0.041887
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 97369743, 
            "distinct_read_pairs": 89614605, 
            "one_read_pair": 82378477, 
            "two_read_pair": 6748670, 
            "NRF": 0.920354, 
            "PBC1": 0.919253, 
            "PBC2": 12.206624
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 86645143, 
            "distinct_read_pairs": 83016384, 
            "one_read_pair": 79488299, 
            "two_read_pair": 3431092, 
            "NRF": 0.958119, 
            "PBC1": 0.957501, 
            "PBC2": 23.167056
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 179234988, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 179234988, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 179234988, 
            "paired_qc_failed": 0, 
            "read1": 89617494, 
            "read1_qc_failed": 0, 
            "read2": 89617494, 
            "read2_qc_failed": 0, 
            "paired_properly": 179234988, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 179234988, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 166141354, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 166141354, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 166141354, 
            "paired_qc_failed": 0, 
            "read1": 83070677, 
            "read1_qc_failed": 0, 
            "read2": 83070677, 
            "read2_qc_failed": 0, 
            "paired_properly": 166141354, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 166141354, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 206339, 
        "Np": 0, 
        "N_opt": 206339, 
        "N_consv": 206339, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.176280145495005, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1847784, 
            "argmin_corr": 1500, 
            "min_corr": 0.1731512, 
            "NSC": 1.018071, 
            "RSC": 0.2691057
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.232311301266
        }, 
        "rep1-pr1": {
            "FRiP": 0.213395983686
        }, 
        "rep1-pr2": {
            "FRiP": 0.213379272423
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.151749979816
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.25334483972, 
            "auc": 0.496278339267, 
            "ch_div": 0.100880858227, 
            "elbow_pt": 0.0, 
            "jsd": 0.583941430725, 
            "syn_auc": 0.496633121793, 
            "syn_elbow_pt": 0.200230700283, 
            "syn_jsd": 0.332219572317
        }
    ]
}
