/EXTERNAL DEEP/K008974_K008975_K008976_K008977_K008978_K008979_K008980_K008981_7_lane_gembs/51_Hf13.Bisulfite-Seq.DNA_methylation.EGAX00001612139.51
BACK
SAMPLE K008974_K008975_K008976_K008977_K008978_K008979_K008980_K008981_7_lane_gembs LANE 51_Hf13.Bisulfite-Seq.DNA_methylation.EGAX00001612139.51
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 43572421 | 100.00 % | 43572421 | 100.00 % | 0 | 0.00 % |
| General Reads | 42913301 | 98.49 % | 42913301 | 98.49 % | 0 | 0.00 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 2 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 659118 | 1.51 % | 659118 | 1.51 % | 0 | 0.00 % |
| Bisulfite_reads C2T | 21778496 | 49.98 % | 21778496 | 49.98 % | 0 | 0.00 % |
| Bisulfite_reads G2A | 21134807 | 48.51 % | 21134807 | 48.51 % | 0 | 0.00 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 34620458 |
| Average Unique | 80.68 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 974932457 | 29.45 % |
| Base Counts Overall C | 30037247 | 0.91 % |
| Base Counts Overall G | 725049711 | 21.90 % |
| Base Counts Overall T | 1536959550 | 46.42 % |
| Base Counts Overall N | 43708826 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 82 | 628880 |
| 33 | 144370 |
| 80 | 399770 |
| 66 | 448222 |
| 23 | 112472 |
| 53 | 400958 |
| 65 | 448562 |
| 20 | 104456 |
| 27 | 108401 |
| 25 | 108742 |
| 76 | 383900 |
| 34 | 144502 |
| 30 | 113505 |
| 49 | 387000 |
| 59 | 425240 |
| 86 | 199985 |
| 51 | 384786 |
| 79 | 366576 |
| 50 | 380836 |
| 89 | 951322 |
| 71 | 438214 |
| 41 | 267953 |
| 62 | 446782 |
| 67 | 459011 |
| 44 | 338521 |
| 37 | 190783 |
| 92 | 7830906 |
| 60 | 429903 |
| 31 | 127507 |
| 48 | 373505 |
| 21 | 112478 |
| 22 | 101111 |
| 52 | 399574 |
| 77 | 324654 |
| 87 | 625870 |
| 28 | 109477 |
| 70 | 442866 |
| 74 | 448113 |
| 42 | 291438 |
| 90 | 1866887 |
| 78 | 336262 |
| 69 | 451056 |
| 56 | 431069 |
| 39 | 234252 |
| 35 | 152601 |
| 84 | 2206025 |
| 40 | 245094 |
| 54 | 415143 |
| 58 | 428730 |
| 73 | 443479 |
| 46 | 367774 |
| 91 | 6949884 |
| 55 | 426280 |
| 63 | 435248 |
| 47 | 382226 |
| 45 | 349467 |
| 43 | 315153 |
| 36 | 174236 |
| 83 | 948923 |
| 29 | 112473 |
| 24 | 111098 |
| 61 | 427884 |
| 64 | 444682 |
| 32 | 117703 |
| 75 | 431977 |
| 38 | 214539 |
| 26 | 115543 |
| 88 | 601447 |
| 57 | 437887 |
| 81 | 448429 |
| 68 | 443784 |
| 72 | 442193 |
| 85 | 1261842 |