{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 112321412, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 105291028, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.74, 
            "paired": 112321412, 
            "paired_qc_failed": 0, 
            "read1": 56160706, 
            "read1_qc_failed": 0, 
            "read2": 56160706, 
            "read2_qc_failed": 0, 
            "paired_properly": 103623839, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.26, 
            "with_itself": 104571239, 
            "with_itself_qc_failed": 0, 
            "singletons": 719789, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.64, 
            "diff_chroms": 532350, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 123193466, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 118923949, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.53, 
            "paired": 123193466, 
            "paired_qc_failed": 0, 
            "read1": 61596733, 
            "read1_qc_failed": 0, 
            "read2": 61596733, 
            "read2_qc_failed": 0, 
            "paired_properly": 116106964, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.25, 
            "with_itself": 118122229, 
            "with_itself_qc_failed": 0, 
            "singletons": 801720, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.65, 
            "diff_chroms": 1326630, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 42516451, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3165080, 
            "paired_opt_dupes": 36783, 
            "dupes_pct": 0.074444
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 48288802, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2118238, 
            "paired_opt_dupes": 32462, 
            "dupes_pct": 0.043866
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42516386, 
            "distinct_read_pairs": 39351314, 
            "one_read_pair": 36393120, 
            "two_read_pair": 2764157, 
            "NRF": 0.925556, 
            "PBC1": 0.924826, 
            "PBC2": 13.166083
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 48279257, 
            "distinct_read_pairs": 46161447, 
            "one_read_pair": 44113515, 
            "two_read_pair": 1980535, 
            "NRF": 0.956134, 
            "PBC1": 0.955635, 
            "PBC2": 22.273535
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 78702742, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 78702742, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 78702742, 
            "paired_qc_failed": 0, 
            "read1": 39351371, 
            "read1_qc_failed": 0, 
            "read2": 39351371, 
            "read2_qc_failed": 0, 
            "paired_properly": 78702742, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 78702742, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 92341128, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92341128, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 92341128, 
            "paired_qc_failed": 0, 
            "read1": 46170564, 
            "read1_qc_failed": 0, 
            "read2": 46170564, 
            "read2_qc_failed": 0, 
            "paired_properly": 92341128, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 92341128, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 103624, 
        "Np": 0, 
        "N_opt": 103624, 
        "N_consv": 103624, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.186982857824478, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1943241, 
            "argmin_corr": 1500, 
            "min_corr": 0.1803944, 
            "NSC": 1.036522, 
            "RSC": 0.4729776
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.293740013358
        }, 
        "rep1-pr1": {
            "FRiP": 0.261495486529
        }, 
        "rep1-pr2": {
            "FRiP": 0.26160234446
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.215839183922
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.231706105025, 
            "auc": 0.494397413997, 
            "ch_div": 0.132786072437, 
            "elbow_pt": 2.08488056379e-273, 
            "jsd": 0.63628675618, 
            "syn_auc": 0.505409598322, 
            "syn_elbow_pt": 0.21759798464, 
            "syn_jsd": 0.349959875466
        }
    ]
}